<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">We are pleased to announce that the latest Ensembl update (e!80) has been released: <a href="http://www.ensembl.org/" class="">http://www.ensembl.org/</a><br class=""><br class=""><blockquote style="margin: 0px 0px 0px 40px; border: none; padding: 0px;" class=""></blockquote>Highlights of this release include:<div class=""><br class=""><blockquote style="margin: 0 0 0 40px; border: none; padding: 0px;" class=""><div class=""><a href="http://www.1000genomes.org/announcements/official-release-phase3-alignment-data-available-2013-05-25" data-mce-href="http://www.1000genomes.org/announcements/official-release-phase3-alignment-data-available-2013-05-25" class="" style="line-height: 1.625; widows: 1;">1000 Genomes phase 3</a><span style="line-height: 1.625; widows: 1;" class=""> </span><span style="line-height: 1.625; widows: 1;" class="">and</span><span style="line-height: 1.625; widows: 1;" class=""> </span><a href="http://www.ncbi.nlm.nih.gov/news/10-17-2014-dbsnp-human-build-142/" data-mce-href="http://www.ncbi.nlm.nih.gov/news/10-17-2014-dbsnp-human-build-142/" class="" style="line-height: 1.625; widows: 1;">dbSNP build 142</a><span style="line-height: 1.625; widows: 1;" class=""> </span><span style="line-height: 1.625; widows: 1;" class="">studies imported for</span><span style="line-height: 1.625; widows: 1;" class=""> </span><a href="http://e80.ensembl.org/Homo_sapiens/Info/Index" data-mce-href="http://e80.ensembl.org/Homo_sapiens/Info/Index" class="" style="line-height: 1.625; widows: 1;">human</a></div><div class=""><a href="https://www.ebi.ac.uk/gxa/home" data-mce-href="https://www.ebi.ac.uk/gxa/home" class="" style="line-height: 1.625; widows: 1;">Gene Expression Atlas</a><span style="line-height: 1.625; widows: 1;" class=""> </span><span style="line-height: 1.625; widows: 1;" class="">Widget</span></div><div class=""><span style="line-height: 1.625; widows: 1;" class="">Updated</span><span style="line-height: 1.625; widows: 1;" class=""> </span><a href="http://e80.ensembl.org/Danio_rerio/Info/Index" data-mce-href="http://e80.ensembl.org/Danio_rerio/Info/Index" class="" style="line-height: 1.625; widows: 1;">zebrafish</a><span style="line-height: 1.625; widows: 1;" class=""> and</span><span style="line-height: 1.625; widows: 1;" class=""> </span><a href="http://e80.ensembl.org/Mus_musculus/Info/Index" data-mce-href="http://e80.ensembl.org/Mus_musculus/Info/Index" class="" style="line-height: 1.625; widows: 1;">rat</a><span style="line-height: 1.625; widows: 1;" class=""> </span><span style="line-height: 1.625; widows: 1;" class="">gene annotation based on the GRCz10 and Rnor_6.0 assemblies respectively</span></div><div class=""><span style="line-height: 1.625; widows: 1;" class="">Track label improvement</span></div><div class=""><span style="line-height: 1.625; widows: 1;" class="">New user data track type: long-range interactions</span></div><div class=""><a href="http://e80.ensembl.org/Mus_musculus/Info/Index" data-mce-href="http://e80.ensembl.org/Mus_musculus/Info/Index" class="" style="line-height: 1.625; widows: 1;">Mouse</a><span style="line-height: 1.625; widows: 1;" class=""> </span><span style="line-height: 1.625; widows: 1;" class="">GENCODE M5 (GRCm38.p3): An updated version of the GENCODE gene set</span></div><div class=""><span style="widows: 1;" class=""><span style="line-height: 1.625;" class="">We</span><span style="line-height: 19px;" class="">’</span><span style="line-height: 1.625;" class="">ve imported sequence variants from </span></span><span style="line-height: 1.625; widows: 1;" class="">dbSNP build 142 for</span><span style="line-height: 1.625; widows: 1;" class=""> </span><a href="http://e80.ensembl.org/Mus_musculus/Info/Index" data-mce-href="http://e80.ensembl.org/Mus_musculus/Info/Index" class="" style="line-height: 1.625; widows: 1;">mouse</a><span style="line-height: 1.625; widows: 1;" class=""> </span><span style="line-height: 1.625; widows: 1;" class="">and</span><span style="line-height: 1.625; widows: 1;" class=""> </span><a href="http://e80.ensembl.org/Bos_taurus" data-mce-href="http://e80.ensembl.org/Bos_taurus" class="" style="line-height: 1.625; widows: 1;">cow</a>, <span style="line-height: 1.625; widows: 1;" class="">dbSNP build 143 for</span><span style="line-height: 1.625; widows: 1;" class=""> </span><a href="http://e80.ensembl.org/Ovis_aries" data-mce-href="http://e80.ensembl.org/Ovis_aries" class="" style="line-height: 1.625; widows: 1;">sheep</a><span style="line-height: 1.625; widows: 1;" class=""> </span><span style="line-height: 1.625; widows: 1;" class="">and</span><span style="line-height: 1.625; widows: 1;" class=""> </span><a href="http://e80.ensembl.org/Sus_scrofa" data-mce-href="http://e80.ensembl.org/Sus_scrofa" class="" style="line-height: 1.625; widows: 1;">pig</a></div><div class=""><font color="#000000" class="" style="line-height: 1.625; widows: 1;"><a href="http://e80.ensembl.org/info/data/biomart/index.html" data-mce-href="http://e80.ensembl.org/info/data/biomart/index.html" class="" style="line-height: 1.625; widows: 1;">New BioMart documentation</a></font></div><div class=""><span style="line-height: 1.625; widows: 1;" class="">New export options for comparative views (</span><a href="http://e80.ensembl.org/Homo_sapiens/Gene/Compara_Ortholog?g=ENSG00000139618;r=13:32315474-32400266" data-mce-href="http://e80.ensembl.org/Homo_sapiens/Gene/Compara_Ortholog?g=ENSG00000139618;r=13:32315474-32400266" class="" style="line-height: 1.625; widows: 1;">homologues</a><span style="line-height: 1.625; widows: 1;" class="">,</span><span style="line-height: 1.625; widows: 1;" class=""> </span><a href="http://e80.ensembl.org/Homo_sapiens/Gene/Compara_Tree?g=ENSG00000139618;r=13:32315474-32400266" data-mce-href="http://e80.ensembl.org/Homo_sapiens/Gene/Compara_Tree?g=ENSG00000139618;r=13:32315474-32400266" class="" style="line-height: 1.625; widows: 1;">gene trees</a><span style="line-height: 1.625; widows: 1;" class=""> </span><span style="line-height: 1.625; widows: 1;" class="">and OrthoXML filtering)</span></div><div class=""><span style="line-height: 1.625; widows: 1;" class="">Gap initiation update for BLAT and BLAST</span></div></blockquote><div class=""><span class=""><div class=""><br class=""><div class=""><div class="">A complete list of the changes in release 80 can be found at <a href="http://www.ensembl.org/info/website/news.html" class="">http://www.ensembl.org/info/website/news.html</a></div><div class=""><div class=""><br class="">For the latest news from the Ensembl project visit our blog at <a href="http://www.ensembl.info" class="">http://www.ensembl.info</a><br class=""><br class="">The release 80 blog post can be viewed here: <a href="http://www.ensembl.info/blog/2015/05/21/ensembl-80-has-been-released/" class="">http://www.ensembl.info/blog/2015/05/21/ensembl-80-has-been-released/</a></div><div class=""><br class=""></div><div class=""><br class="">Best Regards,<br class="">Thomas</div></div></div></div></span><div class="">
<div class=""><div class="" style="orphans: 2; widows: 2;">--</div><div class="" style="orphans: 2; widows: 2;">Thomas Maurel<br class="">Bioinformatician - Ensembl Production Team<br class="">European Bioinformatics Institute (EMBL-EBI)<br class="">European Molecular Biology Laboratory<br class="">Wellcome Trust Genome Campus<br class="">Hinxton<br class="">Cambridge CB10 1SD<br class="">United Kingdom</div></div>
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