<html><head></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div><div>On Mar 30, 2011, at 2:23 AM, Anne Parker wrote:</div><blockquote type="cite"><div>On 29 Mar 2011, at 21:01, Ken Youens-Clark wrote:<br><br><blockquote type="cite">Hi,<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">I would like to add some style information to a dynamically loaded GFF file, e.g.:<br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite"><span class="Apple-tab-span" style="white-space:pre"> </span><a href="http://www.gramene.org/Oryza_sativa/Location/View?r=1:3000-18000;contigviewbottom=url:http://brie.cshl.edu/kyc/rice_3514.gff=normal">http://www.gramene.org/Oryza_sativa/Location/View?r=1:3000-18000;contigviewbottom=url:http://brie.cshl.edu/kyc/rice_3514.gff=normal</a><br></blockquote><blockquote type="cite"><br></blockquote><blockquote type="cite">Is it possible for me to add into the "rice_3514.gff" something to have the different features (e.g., "gene," "exon," "match," etc.) drawn differently? As it is, they all just get grouped as big red blocks.<br></blockquote><font class="Apple-style-span" color="#006312"><br></font>Hi Ken<br><br>At the moment we only support a limited number of styling options, which does not include changing the drawing style. That's something we've been asked about, but our main focus in recent releases has been on supporting additional file formats.<br><br>You can see the available options here:<br><br><a href="http://www.ensembl.org/info/website/upload/index.html#formats">http://www.ensembl.org/info/website/upload/index.html#formats</a><br><br>Cheers<br><br>Anne</div></blockquote><br></div><div>Anne,</div><div><br></div><div>Turns out that your support of other formats is the key! Using the BED format, I can get it to work by setting itemRgb="On" and indicating RGB values in one of the columns.</div><div><br></div><div><span class="Apple-tab-span" style="white-space:pre"> </span><a href="http://www.gramene.org/Oryza_sativa/Location/View?r=1:3000-18000;contigviewbottom=url:http://brie.cshl.edu/kyc/rice_3514-f.bed=normal">http://www.gramene.org/Oryza_sativa/Location/View?r=1:3000-18000;contigviewbottom=url:http://brie.cshl.edu/kyc/rice_3514-f.bed=normal</a></div><div><br></div><div>ky</div></body></html>