Hi All<div><br><div><b>I am building Ensembl Genomes mirror. When start it up, it shows some error messages about  'Can't locate Bio/DB/Taxonomy.pm and GraphViz.pm'.</b></div><div><br></div><div>Can't locate Bio/DB/Taxonomy.pm in @INC (@INC contains: /usr/local/ensembl_fungi/eg-plugins/fungi/modules......................</div>
<div>....................... at /usr/local/ensembl_fungi/eg-plugins/common/modules/Bio/Species.pm line 102.<div>BEGIN failed--compilation aborted at /usr/local/ensembl_fungi/eg-plugins/common/modules/Bio/Species.pm line 102.</div>
<div>Compilation failed in require at (eval 1109) line 1.</div><div><br></div><div>Can't locate GraphViz.pm in @INC (@INC contains: /usr/local/ensembl_fungi/eg-plugins/fungi/modules ............................</div><div>
........................ at /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Tools/OntologyVisualisation.pm line 5.</div><div>BEGIN failed--compilation aborted at /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Tools/OntologyVisualisation.pm line 5.</div>
<div>Compilation failed in require at (eval 1220) line 1.</div><div><br></div><div><b>I can see the web page, but cannot get any data. In logs/error.log file, it contains the following error message.</b></div><div><br></div>
<div>-------------------- WARNING ----------------------</div><div>MSG: Could not find MetaContainer adaptor in the registry for Saccharomyces_cerevisiae core</div><div><div>FILE: EnsEMBL/DBSQL/DBAdaptor.pm LINE: 904</div>
</div><div>CALLED BY: EnsEMBL/DBSQL/CoordSystemAdaptor.pm  LINE: 274</div><div><div>[Wed Feb 22 22:13:53 2012] [error] [client 192.168.30.101] \n-------------------- EXCEPTION --------------------\nMSG: Could not get adaptor MetaContainer for Saccharomyces_cerevisiae core\n\nSTACK Bio::EnsEMBL::DBSQL::DBAdaptor::AUTOLOAD /usr/local/ensembl_fungi/ensembl/modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm:909\nSTACK Bio::EnsEMBL::DBSQL::CoordSystemAdaptor::_cache_mapping_paths /usr/local/ensembl_fungi/ensembl/modules/Bio/EnsEMBL/DBSQL/CoordSystemAdaptor.pm:274\nSTACK Bio::EnsEMBL::DBSQL::CoordSystemAdaptor::new /usr/local/ensembl_fungi/ensembl/modules/Bio/EnsEMBL/DBSQL/CoordSystemAdaptor.pm:213\nSTACK Bio::EnsEMBL::Registry::get_adaptor /usr/local/ensembl_fungi/ensembl/modules/Bio/EnsEMBL/Registry.pm:1014\nSTACK Bio::EnsEMBL::DBSQL::DBAdaptor::AUTOLOAD /usr/local/ensembl_fungi/ensembl/modules/Bio/EnsEMBL/DBSQL/DBAdaptor.pm:896\nSTACK EnsEMBL::Web::Factory::Location::_adaptor /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Factory/Location.pm:48\nSTACK EnsEMBL::Web::Factory::Location::_coord_system_adaptor /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Factory/Location.pm:39\nSTACK EnsEMBL::Web::Factory::Location::__set_species /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Factory/Location.pm:90\nSTACK EnsEMBL::Web::Factory::Location::new /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Factory/Location.pm:20\nSTACK EnsEMBL::Web::Root::new_module /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Root.pm:501\nSTACK EnsEMBL::Web::Root::new_factory /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Root.pm:491\nSTACK EnsEMBL::Web::Builder::create_factory /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Builder.pm:141\nSTACK EnsEMBL::Web::Builder::create_objects /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Builder.pm:84\nSTACK EnsEMBL::Web::Controller::Page::init /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Controller/Page.pm:27\nSTACK EnsEMBL::Web::Controller::new /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Controller.pm:91\nSTACK EnsEMBL::Web::Apache::SpeciesHandler::handler_species /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Apache/SpeciesHandler.pm:91\nSTACK EnsEMBL::Web::Apache::Handlers::handler /usr/local/ensembl_fungi/modules/EnsEMBL/Web/Apache/Handlers.pm:401\nSTACK (eval) -e:0\nSTACK toplevel -e:0\nEnsembl API version = 65\n---------------------------------------------------\n, referer: <a href="http://172.16.10.12:8900/Saccharomyces_cerevisiae/Info/Index">http://172.16.10.12:8900/Saccharomyces_cerevisiae/Info/Index</a></div>
<div>daniel@TILSI-1-2:/usr/local/ensembl_fungi$ -------------------- WARNING ----------------------FILE: EnsEMBL/DBSQL/DBAdaptor.pm LINE: 904</div><div>--------------------: command not found</div></div><div><br></div><div>
<b>Please give me some help. Thanks million!</b></div><div><br></div><div>Daniel Chen</div>-- <br><div><font face="verdana, sans-serif" size="1">TILSI</font></div><div><font face="verdana, sans-serif" size="1"><span style="background-color:rgb(255,255,255)">Taicang Institute For Life Science Information</span><br style="background-color:rgb(255,255,255)">
<span style="background-color:rgb(255,255,255)">Address: A2/162, Renmin South Road, Taicang, 215400, Jiangsu Province, P.R.China</span><br style="background-color:rgb(255,255,255)"><span style="background-color:rgb(255,255,255)">Phone:£¨+86£©512-82782588</span></font></div>
<br>
</div></div>