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You just need to install the HTML::Strip module in your Perl
environment.<br>
<br>
On 18/05/2012 08:49, 陈岗 wrote:
<blockquote
cite="mid:CABjKtWYVVgEivR7ULXXG6TWaKkj51P6N7omuh6+MzAFnk53g3A@mail.gmail.com"
type="cite">Hi All
<div><br>
</div>
<div>I updated Ensembl from release-66 to 67, and get
following error message:</div>
<div><br>
</div>
<div><br>
</div>
<div>
<div>!!! UNKNOWN RSS METHOD DEFINED at
/usr/local/Ensembl/modules/EnsEMBL/Web/Document/HTML.pm line
143.</div>
<div>EnsEMBL::Web::Root: failed to use
EnsEMBL::Web::Document::HTML::WhatsNew</div>
<div>EnsEMBL::Web::Root: Can't locate HTML/Strip.pm in @INC
(@INC contains:
/usr/local/Ensembl/public-plugins/ensembl/modules
/usr/local/Ensembl/public-plugins/ensembl/modules
/usr/local/Ensembl/ensembl/modules
/usr/local/Ensembl/ensembl-compara/modules
/usr/local/Ensembl/ensembl-draw/modules
/usr/local/Ensembl/ensembl-variation/modules
/usr/local/Ensembl/ensembl-functgenomics/modules
/usr/local/Ensembl/ensembl-external/modules
/usr/local/Ensembl/bioperl-live /usr/local/Ensembl/modules
/usr/local/Ensembl/conf/ /etc/perl /usr/local/lib/perl/5.10.1
/usr/local/share/perl/5.10.1 /usr/lib/perl5 /usr/share/perl5
/usr/lib/perl/5.10 /usr/share/perl/5.10
/usr/local/lib/site_perl . /usr/local/Ensembl) at
/usr/local/Ensembl/modules/EnsEMBL/Web/DBSQL/WebsiteAdaptor.pm
line 12.</div>
<div>BEGIN failed--compilation aborted at
/usr/local/Ensembl/modules/EnsEMBL/Web/DBSQL/WebsiteAdaptor.pm
line 12.</div>
<div>Compilation failed in require at
/usr/local/Ensembl/modules/EnsEMBL/Web/Document/HTML/WhatsNew.pm
line 11.</div>
<div>BEGIN failed--compilation aborted at
/usr/local/Ensembl/modules/EnsEMBL/Web/Document/HTML/WhatsNew.pm
line 11.</div>
<div>Compilation failed in require at (eval 325) line 3.</div>
<div> at /usr/local/Ensembl/modules/EnsEMBL/Web/Root.pm line 136</div>
<div>
EnsEMBL::Web::Root::dynamic_use('EnsEMBL::Web::Controller::SSI=HASH(0x6a30ee8)',
'EnsEMBL::Web::Document::HTML::WhatsNew') called at
/usr/local/Ensembl/modules/EnsEMBL/Web/Controller.pm line 395</div>
<div>
EnsEMBL::Web::Controller::_use('EnsEMBL::Web::Controller::SSI=HASH(0x6a30ee8)',
'EnsEMBL::Web::Document::HTML::WhatsNew',
'EnsEMBL::Web::Hub=HASH(0x6937990)') called at
/usr/local/Ensembl/modules/EnsEMBL/Web/Controller/SSI.pm line
167</div>
<div>
EnsEMBL::Web::Controller::SSI::template_SCRIPT('EnsEMBL::Web::Controller::SSI=HASH(0x6a30ee8)',
undef) called at
/usr/local/Ensembl/modules/EnsEMBL/Web/Controller/SSI.pm line
78</div>
<div>
EnsEMBL::Web::Controller::SSI::content('EnsEMBL::Web::Controller::SSI=HASH(0x6a30ee8)')
called at
/usr/local/Ensembl/modules/EnsEMBL/Web/Controller/SSI.pm line
87</div>
<div>
EnsEMBL::Web::Controller::SSI::render_page('EnsEMBL::Web::Controller::SSI=HASH(0x6a30ee8)')
called at
/usr/local/Ensembl/modules/EnsEMBL/Web/Controller/SSI.pm line
47</div>
<div>
EnsEMBL::Web::Controller::SSI::_init('EnsEMBL::Web::Controller::SSI=HASH(0x6a30ee8)')
called at
/usr/local/Ensembl/modules/EnsEMBL/Web/Controller/SSI.pm line
22</div>
<div>
EnsEMBL::Web::Controller::SSI::init('EnsEMBL::Web::Controller::SSI=HASH(0x6a30ee8)')
called at /usr/local/Ensembl/modules/EnsEMBL/Web/Controller.pm
line 91</div>
<div>
EnsEMBL::Web::Controller::new('EnsEMBL::Web::Controller::SSI',
'Apache2::RequestRec=SCALAR(0x255f5f0)', 'HASH(0x68ff648)')
called at /usr/local/Ensembl/modules/EnsEMBL/Web/Apache/SSI.pm
line 64</div>
<div>
EnsEMBL::Web::Apache::SSI::handler('Apache2::RequestRec=SCALAR(0x255f5f0)',
'HASH(0x68ff648)') called at
/usr/local/Ensembl/modules/EnsEMBL/Web/Apache/Handlers.pm line
473</div>
<div>
EnsEMBL::Web::Apache::Handlers::handler('Apache2::RequestRec=SCALAR(0x255f5f0)')
called at -e line 0</div>
<div> eval {...} called at -e line 0</div>
<div>[Fri May 18 14:13:13 2012] [error] [client 192.168.30.5]
Can't locate object method "render" via package
"EnsEMBL::Web::Document::HTML::WhatsNew" at
/usr/local/Ensembl/modules/EnsEMBL/Web/Controller/SSI.pm line
174.\n</div>
<div><br>
</div>
<div><br>
</div>
<div>I installed package HTML::Strip from CPAN, add its
directory to WebsiteAdaptor.pm, as</div>
<div><br>
</div>
<div>
<div>BEGIN {unshift
(@INC,'/usr/local/lib/perl5/site_perl/5.14.1/x86_64-linux-thread-multi'); }</div>
</div>
<div><br>
</div>
<div>But still get error: </div>
<div><br>
</div>
<div>
<div>!!! UNKNOWN RSS METHOD DEFINED at
/usr/local/Ensembl/modules/EnsEMBL/Web/Document/HTML.pm line
143.</div>
<div>EnsEMBL::Web::Root: failed to use
EnsEMBL::Web::Document::HTML::WhatsNew</div>
<div>EnsEMBL::Web::Root: Can't locate HTML/Strip.pm in @INC
(@INC .........................</div>
</div>
<div>...........................................................................................................................</div>
<div><br>
</div>
<div>Where should I modify the directory ?</div>
<div><br>
</div>
<div>Thanks</div>
-- <br>
<div><font face="verdana, sans-serif" size="1">Gang Chen</font></div>
<div><font face="verdana, sans-serif" size="1">TILSI</font></div>
<div><font face="verdana, sans-serif" size="1"><span
style="background-color:rgb(255,255,255)">Taicang
Institute For Life Science Information</span><br
style="background-color:rgb(255,255,255)">
<span style="background-color:rgb(255,255,255)">Address:
A2/162, Renmin South Road, Taicang, 215400, Jiangsu
Province, P.R.China</span><br
style="background-color:rgb(255,255,255)">
<span style="background-color:rgb(255,255,255)">Phone:
（+86）512-82782588</span></font></div>
<br>
</div>
<br>
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<pre wrap="">_______________________________________________
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</pre>
</blockquote>
<br>
<pre class="moz-signature" cols="72">--
Jay Humphrey Ensembl Genomes Web Developer
EMBL-EBI Tel: +44-(0)1223-492682
Wellcome Trust Genome Campus Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK <a class="moz-txt-link-freetext" href="http://www.ensemblgenomes.org/">http://www.ensemblgenomes.org/</a> </pre>
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