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</o:shapelayout></xml><![endif]--></head><body lang=EN-GB link=blue vlink=purple><div class=WordSection1><p class=MsoNormal><span style='color:#1F497D'><o:p> </o:p></span></p><p class=MsoNormal>Hi <span style='color:#1F497D'> - just to let someone know – if this is a bug</span><o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>there seems to be a snafoo with some of the ‘species.url’ values <span style='color:#1F497D'>recorded in the core.meta table </span>in ensemblgenomes<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>for example for Vine the ‘species.url’ value ‘Vitis vinifera’ is not valid in urls , even if URLEncoded<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>e.g.<o:p></o:p></p><p class=MsoNormal><a href="http://plants.ensembl.org/Vitis">http://plants.ensembl.org/Vitis</a> vinifera/Location/View?r=1:33171-36056<o:p></o:p></p><p class=MsoNormal><a href="http://plants.ensembl.org/Vitis%20vinifera/Location/View?r=1:33171-36056">http://plants.ensembl.org/Vitis%20vinifera/Location/View?r=1:33171-36056</a><o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>are both invalid – I’m guessing that the space should have been converted to an underscore in the pipeline.<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>the ‘species.production’ name does work: ‘vitis_vinifera’, and is redirected to to ‘Vitis_finifera’<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>on ensembl.org there aliasing allowing ‘Homo sapiens’ to be redirected to  ‘Homo_sapiens’<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>cheers<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>trevor<o:p></o:p></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><b><span style='font-size:12.0pt;font-family:"Arial","sans-serif";color:navy;mso-fareast-language:EN-GB'>Trevor Paterson PhD<br></span></b><span style='font-size:12.0pt;font-family:"Arial","sans-serif";color:navy;mso-fareast-language:EN-GB'><a href="mailto:trevor.paterson@roslin.ed.ac.uk">trevor.paterson@roslin.ed.ac.uk</a></span><span style='font-size:12.0pt;font-family:"Times New Roman","serif";mso-fareast-language:EN-GB'><o:p></o:p></span></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><span style='font-size:12.0pt;font-family:"Arial","sans-serif";color:navy;mso-fareast-language:EN-GB'>Bioinformatics <br>The Roslin Institute<br>Royal (Dick) School of Veterinary Studies<br>University of Edinburgh<br>Easter Bush<br>Midlothian<br>EH25 9RG<br>Scotland UK<br><br>phone +44 (0)131 651 9157<br><br><a href="http://bioinformatics.roslin.ed.ac.uk/">http://bioinformatics.roslin.ed.ac.uk/</a></span><span style='font-size:12.0pt;font-family:"Times New Roman","serif";color:black;mso-fareast-language:EN-GB'><br></span><span style='font-size:10.0pt;font-family:"Times New Roman","serif";color:navy;mso-fareast-language:EN-GB'><br></span><span style='font-size:12.0pt;font-family:"Arial","sans-serif";color:green;mso-fareast-language:EN-GB'>Please consider the environment before printing this e-mail</span><span style='font-size:12.0pt;font-family:"Times New Roman","serif";mso-fareast-language:EN-GB'><o:p></o:p></span></p><p class=MsoNormal style='mso-margin-top-alt:auto;mso-margin-bottom-alt:auto'><i><span style='font-size:10.0pt;font-family:"Times New Roman","serif";color:navy;mso-fareast-language:EN-GB'>The University of Edinburgh is a charitable body, registered in Scotland with registration number SC005336</span></i><span style='font-size:10.0pt;font-family:"Arial","sans-serif";color:navy;mso-fareast-language:EN-GB'><br><b>Disclaimer:This e-mail and any attachments are confidential and intended solely for the use of the recipient(s) to whom they are addressed. If you have received it in error, please destroy all copies and inform the sender.</b></span><span style='font-size:12.0pt;font-family:"Times New Roman","serif";mso-fareast-language:EN-GB'> <o:p></o:p></span></p><p class=MsoNormal><o:p> </o:p></p></div></body></html>