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<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Hello Rhoda,</p>
<p style="-qt-paragraph-type:empty; margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; "> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">great to hear that the isse can be fixed today or tomorrow. As i said, quite a lot of code depends on it. If the archive can be fixed even earlier that would be even better.</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">For the future, are there any beta builds available of future releases? I would be happy to test my software before the official release to see if anything is broken. As this is the second time in a row a functionallity i depend on disapears, this would be a great way to avoid future problems.</p>
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<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Best regards</p>
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<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Beat Wolf</p>
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<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">On Tuesday 18 June 2013 19.52:44 Rhoda Kinsella wrote:<br /></p>
<p style=" margin-top:12px; margin-bottom:12px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Hi Beat</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Thank you for reporting these issues. You are correct, we are missing the information you mentioned. We will try to rectify this as quickly as possible but it may take a day or two to generate and add to the live BioMart database. In the mean time, I will report the issue with the archive BioMart to our web team and hopefully you should be able to get the data from there until we reinstate the data. Apologies for any inconvenience caused and thanks again for reporting the bugs.</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Regards</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Rhoda</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><br /></p>
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<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">On 18 Jun 2013, at 19:13, Beat Wolf <<a href="mailto:wolf@fryx.ch"><span style=" text-decoration: underline; color:#0057ae;">wolf@fryx.ch</span></a>> wrote:</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:0px; margin-right:0px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><br /></p>
<p style=" margin-top:12px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">I also couldn't get the 71 archive to work. The url should be <a href="http://apr2013.archive.ensembl.org/biomart/"><span style=" text-decoration: underline; color:#0057ae;">http://apr2013.archive.ensembl.org/biomart/</span></a></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">right?</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">The changelog doesn't seem to indicate that the functionality i need was <span style=" color:#1f1c1b; background-color:#ffffff;">removed. Also, in the changelog of </span><span style=" font-size:13px; color:#1f1c1b; background-color:#ffffff;">Ensembl Genes 72</span><span style=" color:#1f1c1b; background-color:#ffffff;">there is this entry:</span></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><span style=" font-size:13px; color:#1f1c1b; background-color:#ffffff;">-Reinstated PolyPhen prediction and score filters and attributes</span></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">That should go into<span style=" color:#1f1c1b; background-color:#ffffff;"> </span><span style=" font-size:13px; color:#1f1c1b; background-color:#ffffff;">Ensembl Variation 72 i guess. Thank you for fixing that by the way, i reported that when 71 got online.</span></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><span style=" font-size:13px; color:#1f1c1b; background-color:#ffffff;">I hope the functionality lost this time can be recovered before the 73 release in a few months... quite some code depends on it. If at least the archive would work that would be perfect.</span></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><span style=" font-size:13px; color:#1f1c1b; background-color:#ffffff;">Thank you for your help</span></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><span style=" font-size:13px; color:#1f1c1b; background-color:#ffffff;">Greetings</span></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"><span style=" font-size:13px; color:#1f1c1b; background-color:#ffffff;">Beat Wolf</span></p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;"> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">On Tuesday 18 June 2013 19.38:37 Beat Wolf wrote:</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> Hello,</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> i have a problem. In the new biomart update that just got out, i can't find</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> a way to get the following information on an exon:</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> 5_utr_start</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> 5_utr_end</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> 3_utr_start</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> 3_utr_end</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> genomic_coding_end</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> cdna_coding_start</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> cds_start</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> cds_end</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> Did it move to some place else? Where can i find this information? Thank you</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> for your help!</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> Best regards</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> Beat Wolf</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> </p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:80px; margin-right:80px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">> _______________________________________________</p>
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<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Rhoda Kinsella Ph.D.</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Ensembl Production Project Leader,</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">European Bioinformatics Institute (EMBL-EBI),</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Wellcome Trust Genome Campus,</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Hinxton,</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">Cambridge,</p>
<p style=" margin-top:0px; margin-bottom:0px; margin-left:40px; margin-right:40px; -qt-block-indent:0; text-indent:0px; -qt-user-state:0;">CB10 1SD</p>
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