<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;">I have just begun to notice a non-destructive error with the Variant Effect Predictor:<div><br></div><div><div>Unable to get Terminal Size. The TIOCGWINSZ ioctl didn't work. The COLUMNS and LINES environment variables didn't work. The resize program didn't work. The stty program didn't work. at /home/myourshaw/apps/ActivePerl-5.18/site/lib/Term/ReadKey.pm line 426.</div><div><br></div><div>This originates with line 1212 in VEP 74</div><div><div> ($w, $h) = GetTerminalSize();</div></div><div>and the actual error comes in ReadKey.pm line 339</div><div><div> @results = GetTermSizeGWINSZ($file);</div></div><div><br></div><div>I don’t remember seeing this before VEP 74, but we recently updated our Perl installation from 5.16 to 5.18 and it is possible that the previous one either did not have Term::ReadKey installed or it behaved differently.</div><div><br></div><div>The error seems to be harmless, but it does put something in STDERR and our users like to see that be empty.</div><div><br></div><div>We actually run with the progress bar turned off. You might want to consider not running GetTerminalSize if it is not needed for the progress bar.</div><div apple-content-edited="true">
<div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><div style="color: rgb(0, 0, 0); letter-spacing: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><span class="Apple-style-span" style="border-collapse: separate; font-size: 12px; border-spacing: 0px;"><div style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;"><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-stroke-width: 0px;"><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-stroke-width: 0px;"><span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: 'Lucida Grande'; font-size: 10px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; border-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-stroke-width: 0px;"><p class="MsoNormal"><font class="Apple-style-span" face="'Devanagari MT'" size="7"><span class="Apple-style-span" style="font-size: 27px;"><font class="Apple-style-span" face="'Lucida Grande'" size="3"><span class="Apple-style-span" style="font-size: 12px;"><br class="Apple-interchange-newline"></span></font><font class="Apple-style-span" size="5"><span class="Apple-style-span" style="font-size: 18px;">ॐ</span></font></span></font></p></span><p></p><p style="margin: 0px 0px 6px; font-style: normal; font-variant: normal; font-weight: normal; font-size: 16px; line-height: normal; font-family: Helvetica;"><span class="Apple-style-span" style="font-family: 'Lucida Grande'; font-size: 10px;">Michael Yourshaw, PhD</span></p><div style="margin: 0px; font-style: normal; font-variant: normal; font-weight: normal; font-size: 10px; line-height: normal; font-family: 'Lucida Grande';"><span style="letter-spacing: 0px;">UCLA Geffen School of Medicine</span></div><div style="margin: 0px; font-style: normal; font-variant: normal; font-weight: normal; font-size: 10px; line-height: normal; font-family: 'Lucida Grande';"><span style="letter-spacing: 0px;">Department of Pediatrics</span></div><div style="margin: 0px; font-style: normal; font-variant: normal; font-weight: normal; font-size: 10px; line-height: normal; font-family: 'Lucida Grande';"><span style="letter-spacing: 0px;">695 Charles E Young Drive S</span></div><div style="margin: 0px; font-style: normal; font-variant: normal; font-weight: normal; font-size: 10px; line-height: normal; font-family: 'Lucida Grande';"><span style="letter-spacing: 0px;">Gonda 5554</span></div><p style="margin: 0px 0px 3px; font-style: normal; font-variant: normal; font-weight: normal; font-size: 10px; line-height: normal; font-family: 'Lucida Grande';"><span style="letter-spacing: 0px;">Los Angeles CA 90095-8348 USA</span></p><p style="margin: 0px 0px 3px; font-style: normal; font-variant: normal; font-weight: normal; font-size: 10px; line-height: normal; font-family: 'Lucida Grande'; color: rgb(0, 0, 153);"><span style="text-decoration: underline; letter-spacing: 0px;"><a href="mailto:myourshaw@ucla.edu">myourshaw@ucla.edu</a></span></p><p style="margin: 0px 0px 6px; font-style: normal; font-variant: normal; font-weight: normal; font-size: 10px; line-height: normal; font-family: 'Lucida Grande';"><span style="letter-spacing: 0px;">970.691.8299</span></p><p style="margin: 0px 0px 6px; font-style: normal; font-variant: normal; font-weight: normal; font-size: 9px; line-height: normal; font-family: 'Lucida Grande';"><span style="letter-spacing: 0px;">This message (including any attachments) is intended only for the use of the addressee(s) and may contain information that is PRIVILEGED and CONFIDENTIAL, and/or may constitute ATTORNEY WORK PRODUCT. If you are not an intended recipient, you are hereby notified that any dissemination of this communication is strictly prohibited. If you have received this message in error, please</span> do not read, copy, or forward this message or any attachments. Please permanently<span style="letter-spacing: 0px;"> delete all copies of the message and any attachments and notify the sender immediately by sending an email to <a href="mailto:myourshaw@yourshaw.org">myourshaw@yourshaw.org</a>. Thank you. As part of our </span>commitment<span style="letter-spacing: 0px;"> to the environment, this </span>message was manufactured with 100% recycled electrons.</p><div><font class="Apple-style-span" size="1"><span class="Apple-style-span" style="font-size: 9px;"><br></span></font></div></span><br class="Apple-interchange-newline"><br class="Apple-interchange-newline"></span></div></span></div></div>
</div>
<br></div></body></html>