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<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif"">Hi,<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">I am trying to setup a local EnsemblGenomes mirror using the virtual machine image from 16.05.2014. However, I am now experiencing a problem with loading the minified
CSS and JS files for the webpage after rebuilding the config. The CSS and JS is generated correctly:<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">[eguser@ensembl minified]$ pwd<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">/ensembl/ensembl-genomes/release-22/ensembl-webcode/htdocs/minified<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">[eguser@ensembl minified]$ ll<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">total 1504<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">-rw-rw-r--. 1 eguser eguser 135881 May 21 08:02 5ec515962656e919612ba04fbe109094.css<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">-rw-rw-r--. 1 eguser eguser 110959 May 21 07:57 8fd260b6d3e136f0c37660917d81358f.js<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">-rw-rw-r--. 1 eguser eguser 563323 May 21 07:57 ad77343cf5657d5f0c9fa74094e26105.js<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">-rw-rw-r--. 1 eguser eguser 561602 May 21 08:02 d215318d4d1cebdf474400add5b8d9d9.js<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">-rw-rw-r--. 1 eguser eguser 151772 May 21 07:57 da7ddbd7793fce75243b054500b1d054.css<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">It can also be accessed via the webpage when entering the URL directly:<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">[eguser@ensembl minified]$ curl "http://10.10.70.129:8080/minified/5ec515962656e919612ba04fbe109094.css"<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">body{font-family:Luxi Sans,Helvetica,Arial,Geneva,sans-serif;font-size:80%;color:#555;background-color:#fff;padding:0;margin:0;border:0}body.ie6{font-size:85%}pre,code,kbd{font-family:Courier
New,Courier,monospace}div,span,p,li,dd,dt,th,td,pre,code,kbd{font-size:1em}body.ie6 th,body.ie6 td{font-size:13px}img{border:0}form{border:0;margin:0 0 1em 0}p{margin:0 0 1em;line-height:1.25em;padding:0}ul,ol{margin:0 0 1.25em;line-height:1.25em;padding-left:2em}pre{margin:0
0 1em}#min_width_container{position:relative;width:100%;min-width:775px}#min_width_holder{display:block}body.ie6 #min_width_container{border-right:775px solid #fff}body.ie6 #min_width_holder{display:inline-block;position:relative;margin-right:-775px}.hidden{display:none}.hide{display:none}.page{text-align:center;padding:.25em}.spinner{height:100px;display:block;border:16px
solid transparent;margin:0 0 16px;text-align:center;background:url(/i/e-loader.gif) no-repeat bottom center}.pointer{cursor:pointer}body.ie6 .spinner{background-color:#fff;border-color:#fff;height:132px}.top-margin{margin-top:1em!important}.bottom-margin{margin-bottom:1em!important}.left-margin{margin-left:1em!important}.right-margin{margin-right:1em!important}…<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">However the CSS and JS links are not set correctly in the HTML page:<o:p></o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas;color:blue"><</span><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas;color:#A31515">title</span><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas;color:blue">></span><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas">Ensembl
Plants<span style="color:blue"></</span><span style="color:#A31515">title</span><span style="color:blue">></span><o:p></o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas"><o:p> </o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas">
<span style="color:blue"><</span><span style="color:#A31515">link</span> <span style="color:red">
rel</span><span style="color:blue">="stylesheet"</span> <span style="color:red">type</span><span style="color:blue">="text/css"</span>
<span style="color:red">media</span><span style="color:blue">="all"</span> <span style="color:red">
href</span><span style="color:blue">="/minified/.css"</span> <span style="color:blue">
/></span><o:p></o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas"><o:p> </o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas">
<span style="color:blue"><</span><span style="color:#A31515">link</span> <span style="color:red">
rel</span><span style="color:blue">="icon"</span> <span style="color:red">href</span><span style="color:blue">="/i/ensembl-favicon.png"</span>
<span style="color:red">type</span><span style="color:blue">="image/png"</span> <span style="color:blue">
/></span><o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">…<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas;color:blue"><</span><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas;color:#A31515">script</span><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas">
<span style="color:red">type</span><span style="color:blue">="text/javascript"</span>
<span style="color:red">src</span><span style="color:blue">="/minified/.js"></</span><span style="color:#A31515">script</span><span style="color:blue">></span><o:p></o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas"><o:p> </o:p></span></p>
<p class="MsoNormal" style="text-autospace:none"><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas;color:blue"></</span><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas;color:#A31515">body</span><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas;color:blue">></span><span lang="EN-US" style="font-size:10.0pt;font-family:Consolas"><o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">I ran the following configuration:<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">==============================================================================<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Server information:<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">==============================================================================<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Ensembl version: 75<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Database Host: 10.10.70.119<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">ORM Databases: user: ensembl_accounts on 10.10.70.119<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">External address: </span><a href="http://ensembl.kws.de:8080/"><span lang="EN-US">http://ensembl.kws.de:8080/</span></a><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Real address: </span><a href="http://ensembl.kws.de:8080"><span lang="EN-US">http://ensembl.kws.de:8080</span></a><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Search Server: <o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Cache namespace: </span><a href="http://ensembl.kws.de:8080"><span lang="EN-US">http://ensembl.kws.de:8080</span></a><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Server root: /ensembl/ensembl-genomes/release-22<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">PID file: /ensembl/ensembl-genomes/release-22/logs/ensembl.kws.de.httpd.pid<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Access logs: /ensembl/ensembl-genomes/release-22/logs/ensembl.kws.de.access_log ensembl_extended<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Error logs: /ensembl/ensembl-genomes/release-22/logs/ensembl.kws.de.error_log<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">CSS file: </span><a href="http://ensembl.kws.de:8080/minified/5ec515962656e919612ba04fbe109094.css"><span lang="EN-US">http://ensembl.kws.de:8080/minified/5ec515962656e919612ba04fbe109094.css</span></a><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">JavaScript file: </span><a href="http://ensembl.kws.de:8080/minified/d215318d4d1cebdf474400add5b8d9d9.js"><span lang="EN-US">http://ensembl.kws.de:8080/minified/d215318d4d1cebdf474400add5b8d9d9.js</span></a><span lang="EN-US"><o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"><o:p> </o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US">Plugins installed: EnsEMBL::Genoverse<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"> EG::Plants<o:p></o:p></span></p>
<p class="MsoPlainText"><span lang="EN-US"> </span>EG::Common<o:p></o:p></p>
<p class="MsoPlainText"> EnsEMBL::Users<o:p></o:p></p>
<p class="MsoPlainText"> <o:p></o:p></p>
<p class="MsoPlainText"><o:p> </o:p></p>
<p class="MsoPlainText">==============================================================================<o:p></o:p></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">Any advice?<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">Thank you,<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif"">Jan<o:p></o:p></span></p>
<p class="MsoNormal"><span lang="EN-US" style="font-size:10.0pt;font-family:"Arial","sans-serif""><o:p> </o:p></span></p>
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