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<div class="moz-cite-prefix">Dear Ksenia,<br>
<br>
Thanks for reporting this problem.<br>
You're right, and we'll aim to fix them in the coming release
which is coming in August. It is actually also a problem on
barley, and we'll fix them as well.<br>
<br>
We notified MIPS who generated the gene sets, and they fixed this
issue in the gene pipeline, so it should not happen again.<br>
<br>
All the best,<br>
Arnaud<br>
<br>
On 17/07/2014 00:31, Ksenia Krasileva wrote:<br>
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<blockquote
cite="mid:CAO-qAgtjewxBkvjcm_zkybBs4r=GSamiVVV-0geWJuDz811UmA@mail.gmail.com"
type="cite">
<div dir="ltr">Dear Ensembl team,
<div><br>
</div>
<div>This is regarding T. aestivum annotation Ensembl v22. </div>
<div>It looks like the stop codons are not part of CDS as
defined by Sequence Ontology but are placed instead in 3'UTRs.</div>
<div><br>
</div>
<div>This affects some feature extractions and variant
prediction with VEP (no 'stop_loss' category).<br clear="all">
<div><br>
</div>
<div>Thank you in advance.</div>
<div><br>
</div>
<div><br>
</div>
<div>
Best wishes,</div>
<div><br>
</div>
<div><br>
</div>
<div>Ksenia</div>
<div><br>
</div>
-- <br>
<div dir="ltr">Ksenia Krasileva, PhD<br>
<br>
Post Doctoral Scholar<br>
USDA NIFA Fellowship<br>
The Dubcovsky Lab<br>
<br>
Department of Plant Sciences<br>
University of California, Davis<br>
124 Robbins Hall<br>
Davis, CA 95616<br>
<a moz-do-not-send="true"
href="mailto:krasileva@ucdavis.edu" target="_blank">krasileva@ucdavis.edu</a><br>
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