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<div style="background-color: rgb(255, 255, 255); ">Hello,</div>
<div style="background-color: rgb(255, 255, 255); "><br>
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<div style="background-color: rgb(255, 255, 255); ">I'm sending because I found a discrepancy between the <a href="http://useast.ensembl.org/biomart/martview">http://useast.ensembl.org/biomart/martview</a>/ and <a href="http://www.ensembl.org/biomart/martservice"></a><a href="http://www.ensembl.org/biomart/martview">http://www.ensembl.org/biomart/</a><a href="http://www.ensembl.org/biomart/martview">martview</a> web
services and would like to confirm that the data I have are complete.</div>
<div style="background-color: rgb(255, 255, 255); "><br>
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<div style="background-color: rgb(255, 255, 255); ">I submitted the following search on both the UK and the US East servers:</div>
<div style="background-color: rgb(255, 255, 255); "><br>
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<div><span style="background-color: rgb(255, 254, 254); "><b>Dataset</b></span></div>
<div><span style="background-color: rgb(254, 253, 253); ">Homo sapiens genes (GRCh38)</span></div>
<div><span class="Apple-tab-span" style="white-space: pre; "></span><b>Filters</b></div>
<div><span class="Apple-tab-span" style="white-space: pre; "></span>With protein(Genbank) ID(s): Excluded</div>
<div><span class="Apple-tab-span" style="white-space: pre; "></span><b>Attributes</b></div>
<div><span class="Apple-tab-span" style="white-space: pre; "></span>Ensembl Gene ID</div>
<div><span class="Apple-tab-span" style="white-space: pre; "></span>Ensembl Transcript ID</div>
<div><span class="Apple-tab-span" style="white-space: pre; "></span>Chromosome Name</div>
<div><span class="Apple-tab-span" style="white-space: pre; "></span>Strand</div>
<div><span class="Apple-tab-span" style="white-space: pre; "></span>Unspliced (Transcript)</div>
<div><span class="Apple-tab-span" style="white-space: pre; "></span>Associated Gene Name</div>
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<div style="background-color: rgb(255, 255, 255); ">But I got different results. The difference is quite big as they include 67,482 and 78,820 sequences accordingly. As far as I checked the file from ensembl.org contained all entries that useast.ensembl.org
had, including some more. </div>
<div style="background-color: rgb(255, 255, 255); "><br>
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<div style="background-color: rgb(255, 255, 255); ">Here are some genes that weren't included in the useast.ensmbl.org but were present in ensembl.org:</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000001084</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000090989</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000104723</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000108846</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000109158</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000109171</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000109180</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000109182</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000109184</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000109452</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000118564</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000118579</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000120708</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000123415</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000129187</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000133835</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000138678</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000145216</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000145868</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000151466</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000163138</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000170365</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000180104</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000196353</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000213347</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000234492</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000245526</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000250328</div>
<div style="background-color: rgb(255, 255, 255); ">ENSG00000278610</div>
<div style="background-color: rgb(255, 255, 255); "><br>
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<div>After noticing this I re-downloaded from useast.ensembl.org several times. Each time the file had a different size and none of the files had the same size as the ensembl.org one.</div>
<div style="background-color: rgb(255, 255, 255); "><br>
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<div style="background-color: rgb(255, 255, 255); ">I would like to know whether the data I downloaded from ensembl.org include all results or if you suggest getting them again in a different way.</div>
<div style="background-color: rgb(255, 255, 255); "><br>
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<div style="background-color: rgb(255, 255, 255); ">Thank you in advance,</div>
<div style="background-color: rgb(255, 255, 255); ">Venetia</div>
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