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<p>Dear list,<br>
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<p>I am wondering what's the new method for replacing <span style="color: rgb(52, 187, 199); font-family: Monaco; font-size: 12px; background-color: rgb(0, 0, 0);">fetch_by_Member_id_Member_id</span>?<br>
</p>
<p><span style="font-size: 12pt;">Because I got a</span><span style="font-size: 12pt;">
</span><span style="font-size: 12pt;">mistake like this:</span><span style="font-size: 12pt;">
</span><span style="font-size: 12pt;">Can't locate object method "fetch_by_Member_id_Member_id".</span><br>
</p>
<p><font size="3">By the way, did the </font>methods<font size="3"> <span style="color: rgb(52, 187, 199); font-family: Monaco; font-size: 12px; background-color: rgb(0, 0, 0);">get_SimpleAlign</span><span style="font-family: Monaco; font-size: 12px; color: rgb(255, 255, 255);">()</span>and <span style="color: rgb(52, 187, 199); font-family: Monaco; font-size: 12px; background-color: rgb(0, 0, 0);">percentage_identity</span><span style="font-family: Monaco; font-size: 12px; color: rgb(255, 255, 255);">()</span>also
have changed?</font></p>
<p>My script as below.<br>
</p>
<p><span style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 16px; background-color: rgb(255, 255, 255);">Thanks a lot for your help.</span><span style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 16px; background-color: rgb(255, 255, 255);"></span><br>
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<p><br>
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<p>Regards,<br>
</p>
<p>Jialin<br>
</p>
<p><br>
</p>
<p><span style="font-size: 9pt;"><span style="font-family: Monaco; background-color: rgb(0, 0, 0); color: rgb(206, 121, 36);">my</span><span style="font-family: Monaco; background-color: rgb(0, 0, 0); color: rgb(255, 255, 255);">
</span><span style="color: rgb(52, 187, 199); font-family: Monaco; background-color: rgb(0, 0, 0);">$homology</span><span style="font-family: Monaco; background-color: rgb(0, 0, 0); color: rgb(255, 255, 255);"> =
</span><span style="color: rgb(52, 187, 199); font-family: Monaco; background-color: rgb(0, 0, 0);">$homology_adaptor->fetch_by_Member_id_Member_id</span><span style="font-family: Monaco; background-color: rgb(0, 0, 0); color: rgb(255, 255, 255);">(</span><span style="color: rgb(52, 187, 199); font-family: Monaco; background-color: rgb(0, 0, 0);">$gene1</span><span style="font-family: Monaco; background-color: rgb(0, 0, 0); color: rgb(255, 255, 255);">,
</span><span style="color: rgb(52, 187, 199); font-family: Monaco; background-color: rgb(0, 0, 0);">$gene2</span><span style="font-family: Monaco; background-color: rgb(0, 0, 0); color: rgb(255, 255, 255);">)->[1]</span><br style="">
</span></p>
<p style="margin-right: 0px; margin-left: 0px; font-family: Monaco; color: rgb(52, 187, 199); background-color: rgb(0, 0, 0);">
<span style="font-size: 9pt;"><span style="color: rgb(206, 121, 36);">my</span><span style="color: rgb(255, 255, 255);">
</span>$simple_align<span style="color: rgb(255, 255, 255);"> = </span>$homology->get_SimpleAlign<span style="color: rgb(255, 255, 255);">();</span><br style="">
</span></p>
<p style="margin-right: 0px; margin-left: 0px; font-family: Monaco; color: rgb(52, 187, 199); background-color: rgb(0, 0, 0);">
<span style="font-size: 9pt;"><span style="color: rgb(206, 121, 36);">print</span><span style="color: rgb(255, 255, 255);">
</span><span style="color: rgb(195, 55, 32);">"</span><span style="color: rgb(213, 59, 211);">\t</span><span style="color: rgb(195, 55, 32);">Identity: "</span><span style="color: rgb(255, 255, 255);">,
</span>$simple_align->percentage_identity<span style="color: rgb(255, 255, 255);">() ,</span><span style="color: rgb(195, 55, 32);">"%</span><span style="color: rgb(213, 59, 211);">\n</span><span style="color: rgb(195, 55, 32);">"</span><span style="color: rgb(255, 255, 255);">;</span></span></p>
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