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<p><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">Dear list </span><br style="font-family: Calibri, Arial, Helvetica, sans-serif;">
<span style="font-family: Calibri, Arial, Helvetica, sans-serif;"></span></p>
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<span style="font-family: Calibri, Arial, Helvetica, sans-serif;"></span></p>
<p><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">I want to retrive mouse and rat homologs, using script as below. However, I get mistake like this:</span><br style="font-family: Calibri, Arial, Helvetica, sans-serif;">
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<p style="margin-right: 0px; margin-left: 0px;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">MSG:
No matches found for name 'Mus musculus' and assembly '--undef--'</span></span></span></span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">STACK Bio::EnsEMBL::Compara::DBSQL::GenomeDBAdaptor::fetch_by_name_assembly
/Users/jliu5/src/ensembl-compara/modules/Bio/EnsEMBL/Compara/DBSQL</span></span></span></span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">/GenomeDBAdaptor.pm:108</span></span></span></span></span></span></span></p>
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<p style="margin-right: 0px; margin-left: 0px; font-size: 13px;"><span style="background-color: rgb(255, 255, 255); color: rgb(255, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(255, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(255, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(255, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(255, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><br style="font-family: Calibri, Arial, Helvetica, sans-serif;">
</span></span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px; font-size: 13px;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt;">I am wondering are there some adaptors or fetch methods ace changed?</span><br style="font-family: Calibri, Arial, Helvetica, sans-serif;">
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<p><span style="color: rgb(255, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">my script:</span></span></p>
<p><span style="font-size: 11pt;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">m</span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">y</span></span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">
</span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$homology_adaptor</span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">
= </span></span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$reg->get_adaptor</span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">(</span></span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"Multi"</span></span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">,
</span></span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"compara"</span></span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">,
</span></span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"Homology"</span></span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">);</span></span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="font-size: 11pt;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">my</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;">
</span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$mlss_adaptor</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">
= </span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$reg->get_adaptor</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">(</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"Multi"</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">,
</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"compara"</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">,
</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"MethodLinkSpeciesSet"</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">);</span></span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="font-size: 11pt;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">my</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;">
</span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$genomedb_adaptor</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">
= </span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$reg->get_adaptor</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">(</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"Multi"</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">,
</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"compara"</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">,
</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"GenomeDB"</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">);</span></span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="font-size: 11pt;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">my</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;">
</span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$sp1_gdb</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">
= </span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$genomedb_adaptor->fetch_by_name_assembly</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">(</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"Mus
musculus"</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">);</span></span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="font-size: 11pt;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">my</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;">
</span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$sp2_gdb</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">
= </span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$genomedb_adaptor->fetch_by_name_assembly</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">(</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">"Rattus
norvegicus"</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">);</span></span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="font-size: 11pt;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">my</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;">
</span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$mlss_orth</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">
= </span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$mlss_adaptor-
> fetch_by_method_link_type_GenomeDBs</span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="font-size: 11pt;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">(</span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">'ENSEMBL_ORTHOLOGUES'</span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">,
[</span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$sp1_gdb</span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">,
</span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$sp2_gdb</span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">]);</span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="font-size: 11pt;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">my</span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;">
</span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">@orthologies</span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">
= </span></span></span></span><span style="background-color: rgb(255, 255, 255); color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="color: rgb(0, 0, 0); font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">@{$homology_adaptor->fetch_all_by_MethodLinkSpeciesSet</span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px;"><span style="font-size: 11pt;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">(</span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">$mlss_orth</span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">)</span></span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">}</span></span><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">;</span></span></span></span></p>
<p style="margin-right: 0px; margin-left: 0px; font-size: 13px;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;"><br style="font-family: Calibri, Arial, Helvetica, sans-serif;">
</span></span></p>
</blockquote>
<span style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">Any ideas?</span></span><br style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;">
<font style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;"><br style="font-family: Calibri, Arial, Helvetica, sans-serif;">
</font><span style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif;">Cheers,</span></span><br style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;">
<p style="margin-right: 0px; margin-left: 0px; font-size: 13px;"><span style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 11pt;">Jialin</span><br style="font-family: Calibri, Arial, Helvetica, sans-serif;">
</p>
<p><br>
</p>
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