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Dear devs,<br>
<br>
I'm experiencing the following warnings when using vep local cache
with variant_effect_predictor script:<br>
<br>
<blockquote>
<pre>Argument "-/C" isn't numeric in numeric eq (==) at /share/apps/src/ensembl_80-variation/modules/Bio/EnsEMBL/Variation/Utils/VEP.pm line 6218.</pre>
<pre>Use of uninitialized value in split at /share/apps/src/ensembl_80-variation/modules/Bio/EnsEMBL/Variation/Utils/VEP.pm line 6223.</pre>
</blockquote>
<br>
If no cache is used warnings disappear.<br>
<br>
Input VCF: example_GRCh38.vcf (inside
<a class="moz-txt-link-freetext" href="https://github.com/Ensembl/ensembl-tools/archive/release/80.zip">https://github.com/Ensembl/ensembl-tools/archive/release/80.zip</a>)<br>
Cache downloaded from:
<a class="moz-txt-link-freetext" href="ftp://ftp.ensembl.org/pub/release-80/variation/VEP/homo_sapiens_vep_80_GRCh38.tar.gz">ftp://ftp.ensembl.org/pub/release-80/variation/VEP/homo_sapiens_vep_80_GRCh38.tar.gz</a><br>
<br>
Best regards,<br>
Guillermo.<br>
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