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Hi Igo,<br>
<br>
We take the SIFT code from <a class="moz-txt-link-freetext" href="http://sift.bii.a-star.edu.sg/">http://sift.bii.a-star.edu.sg/</a>. The
current release uses
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version 5.2.2 and
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UniRef90 (release 2014_11) as the protein database. This changes
when new versions are released but you can always find the current
information here:<br>
<br>
<a class="moz-txt-link-freetext" href="http://www.ensembl.org/info/genome/variation/predicted_data.html#sift">http://www.ensembl.org/info/genome/variation/predicted_data.html#sift</a><br>
<br>
Best wishes,<br>
<br>
Sarah<br>
<br>
<div class="moz-cite-prefix">On 05/08/2015 15:59, Igo Medeiros
wrote:<br>
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<blockquote
cite="mid:20150805145934.9784C1345C4_5C224D6B@hx-mx2.ebi.ac.uk"
type="cite">
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<div>Hi VEP Team,<br>
</div>
The SIFT used in VEP is from <a moz-do-not-send="true"
href="http://sift.jcvi.org">http://sift.jcvi.org</a> or <a
moz-do-not-send="true" href="http://sift.bii.a-star.edu.sg/">http://sift.bii.a-star.edu.sg/</a>?<br>
<br>
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<div class="gmail_extra"><br>
<div class="gmail_quote">2015-08-05 10:21 GMT-03:00 Igo Medeiros
<span dir="ltr"><<a moz-do-not-send="true"
href="mailto:igo701@gmail.com" target="_blank">igo701@gmail.com</a>></span>:<br>
<blockquote class="gmail_quote" style="margin:0 0 0
.8ex;border-left:1px #ccc solid;padding-left:1ex">
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<div>Hi Ensembl Team,<br>
</div>
I didn't find in documentation what protein's database
used in the VEP. Do you know what protein's database used?<span
class="HOEnZb"><font color="#888888"><br clear="all">
<div>
<div><br>
-- <br>
<div>Igo Paixão de Medeiros</div>
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<br>
-- <br>
<div class="gmail_signature">Igo Paixão de Medeiros</div>
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