<div dir="ltr">perl biodbhts/t/00_load.t<br><br>1..3<br>ok 1 - use Bio::DB::HTS;<br>ok 2 - use Bio::DB::HTS::Tabix;<br>ok 3 - use Bio::DB::HTS::Tabix::Iterator;<br></div><br><div class="gmail_quote"><div dir="ltr">пн, 11 апр. 2016 г. в 15:41, Rishi Nag <<a href="mailto:rishi@ebi.ac.uk">rishi@ebi.ac.uk</a>>:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><br>
Hi<br>
<br>
OK - there are some further files that should be moved:<br>
<br>
Can you try<br>
mv ~/ensembl-tools-release-84/scripts/variant_effect_predictor/Bio/HTS.* ~/ensembl-tools-release-84/scripts/variant_effect_predictor/Bio/DB<br>
<br>
and then let me know how it goes?<br>
<br>
Regards<br>
<br>
Rishi<br>
<br>
On 10/04/2016 20:38, Platon workaccount wrote:<br>
> ~/ensembl-tools-release-84/scripts/variant_effect_predictor/Bio$ ls<br>
> DB HTS.c HTS.o HTS.pm HTS.xs<br>
><br>
> ~/ensembl-tools-release-84/scripts/variant_effect_predictor/Bio/DB$ ls<br>
> HTS<br>
><br>
> ~/ensembl-tools-release-84/scripts/variant_effect_predictor/Bio/DB/HTS$ ls<br>
> Alignment.pm AlignWrapper.pm Constants.pm Faidx.c Faidx.o Faidx.pm Faidx.xs FetchIterator.pm Pileup.pm PileupWrapper.pm Query.pm ReadIterator.pm<br>
> Segment.pm Tabix Tabix.pm Target.pm VCF.pm<br>
<br>
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</blockquote></div>