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<p class="MsoNormal">Hello,<o:p></o:p></p>
<p class="MsoNormal">after the installation of VEP84 (API and databases) with cache and plugins I have run variant effect predictor like usually. When I have checked my results returned, I have encountered the internal error when using a flag
<b>--gmaf --maf_1kg --maf_exac --maf_esp</b> that no data have been received back into the final .txt file. If I try to run the same script, the version VEP83, using the databases and cache for version 83, I obtain the correct data. When running VEP84 and databases
and cache 83, no results in these columns appear. If I use plugin dbNSFP, the corresponding values are received as well. But our internal database setup of data coming from NGS is not bulit to cope with different format using plugins.<o:p></o:p></p>
<p class="MsoNormal">So, please, do you know what is going on or where to look for this error?<o:p></o:p></p>
<p class="MsoNormal">Thanks, Bara<o:p></o:p></p>
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<P class=027b080b-4fe1-442b-af78-4a4c31036de8><FONT size=2 face=Arial></FONT><span style='font-family:Arial; font-size:x-small; '>Ing. </span><span style='font-family:Arial; font-size:x-small; '>Barbora</span><FONT size=2 face=Arial> </FONT><span style='font-family:Arial; font-size:x-small; '>Honysová</span><FONT size=2 face=Arial></FONT><span style='font-family:Arial; font-size:x-small; '></span></P>
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