<div dir="ltr">Hi Guillermo,<div><br></div><div>I don't see this issue - see attached screenshot.</div><div><br></div><div>I've also tested with the local script version and it works OK for me. Of course I'm assuming you have --check_existing enabled if you're running the script?</div><div><br></div><div>Regards</div><div><br></div><div>Will McLaren</div><div>Ensembl Variation</div><div><br></div></div><div class="gmail_extra"><br><div class="gmail_quote">On 16 September 2016 at 12:37, Guillermo Marco Puche <span dir="ltr"><<a href="mailto:guillermo.marco@sistemasgenomicos.com" target="_blank">guillermo.marco@sistemasgenomicos.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div text="#000066" bgcolor="#FFFFFF">
<p>Dear devs,</p>
<p>I'm aware of the COSMIC licensing changes. I'm trying to annotate
a huge VCF with latest vep (85). I'm not getting any COSMIC
annotation at all. The following two VCF variants have COSMIC
annotations but I'm getting none with vep:<br>
</p>
<pre>chr1 69224 . A C
chr1 69230 . A C
</pre>
Has been COSMIC removed from Ensembl public annotations even if VCF
headers shows COSMIC=77? I thought that the previous releases would
stay in Ensembl.<br>
<br>
Regards,<br>
Guillermo<br>
</div>
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