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<p>Dear All, <br>
<br>
<br>
We are pleased to announce that Ensembl Genomes 35 has now been
released. <br>
<br>
New and updated genomic sequences are available for all EG
sub-portals, and updated comparative peptide analyses have been
performed for Fungi, Metazoa, Plants, and Protists: <font
face="Helvetica Neue,sans-serif"><a
href="http://bacteria.ensembl.org/"
data-mce-href="http://bacteria.ensembl.org/" style="border:
0px none; font-size: 15px; font-style: inherit; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline; color: rgb(51, 122, 183);
text-decoration: none;"><br>
</a></font></p>
<ul>
<li><a href="http://bacteria.ensembl.org/"
data-mce-href="http://bacteria.ensembl.org/" style="border:
0px none; font-size: 15px; font-style: inherit; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline; color: rgb(51, 122, 183);
text-decoration: none;">Ensembl Bacteria</a> now
incorporates 2460 new genomes, as well as revised assemblies and
annotation for 188 and 234 genomes, respectively;</li>
<li style="border: 0px none; font-size: 15px; font-style: inherit;
font-weight: inherit; margin: 0px; outline: 0px none; padding:
0px; vertical-align: baseline;">
<p><a href="http://fungi.ensembl.org/"
data-mce-href="http://fungi.ensembl.org/" style="border: 0px
none; font-size: 15px; font-style: inherit; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline; color: rgb(51, 122, 183);
text-decoration: none;">Ensembl Fungi</a> now incorporates
more than 100 new genomes, including<span
class="Apple-converted-space"> </span>the <em style="border:
0px none; font-size: 15px; font-style: italic; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline;">Puccinia striiformis</em><span
class="Apple-converted-space"> </span>f. sp.<span
class="Apple-converted-space"> </span><em style="border: 0px
none; font-size: 15px; font-style: italic; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline;">tritici</em><span
class="Apple-converted-space"> </span>PST-130 v1.0 assembly
from<span class="Apple-converted-space"> </span>the Joint
Genome Institute, and provides updates to existing genomes and
annotation. In particular, a new, manually-annotated
genebuild, curated by the community using the WebApollo tool,
has been added for<span class="Apple-converted-space"> </span><em
style="border: 0px none; font-size: 15px; font-style:
italic; font-weight: inherit; margin: 0px; outline: 0px
none; padding: 0px; vertical-align: baseline;">Botrytis
cinerea</em><span class="Apple-converted-space"> </span>B05.10;</p>
</li>
<li style="border: 0px none; font-size: 15px; font-style: inherit;
font-weight: inherit; margin: 0px; outline: 0px none; padding:
0px; vertical-align: baseline;">
<p><a href="http://metazoa.ensembl.org/"
data-mce-href="http://metazoa.ensembl.org/" style="border:
0px none; font-size: 15px; font-style: inherit; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline; color: rgb(51, 122, 183);
text-decoration: none;">Ensembl Metazoa</a><span
class="Apple-converted-space"> </span>adds three new
genomes, including that of Hessian fly. In addition,<span
class="Apple-converted-space"> </span>orthologue metrics
have been calculated for all metazoan species and have been
used to compute a set of “<a
href="http://metazoa.ensembl.org/index.html"
data-mce-href="http://metazoa.ensembl.org/index.html"
style="border: 0px none; font-size: 15px; font-style:
inherit; font-weight: inherit; margin: 0px; outline: 0px
none; padding: 0px; vertical-align: baseline; color: rgb(51,
122, 183); text-decoration: none;">high-confidence</a>”
orthologues;</p>
</li>
<li style="border: 0px none; font-size: 15px; font-style: inherit;
font-weight: inherit; margin: 0px; outline: 0px none; padding:
0px; vertical-align: baseline;">
<p><a href="http://plants.ensembl.org/"
data-mce-href="http://plants.ensembl.org/" style="border:
0px none; font-size: 15px; font-style: inherit; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline; color: rgb(51, 122, 183);
text-decoration: none;">Ensembl Plants</a><span
class="Apple-converted-space"> </span>includes a new genome
assembly and genebuild for<span class="Apple-converted-space"> </span><em
style="border: 0px none; font-size: 15px; font-style:
italic; font-weight: inherit; margin: 0px; outline: 0px
none; padding: 0px; vertical-align: baseline;">Sorghum
bicolor</em>, and an updated genebuild for maize. New
variation data are available for bread wheat, as are new
comparative<span class="Apple-converted-space"> </span>peptide analyses for
all species;</p>
</li>
<li style="border: 0px none; font-size: 15px; font-style: inherit;
font-weight: inherit; margin: 0px; outline: 0px none; padding:
0px; vertical-align: baseline;">
<p><a href="http://protists.ensembl.org/"
data-mce-href="http://protists.ensembl.org/" style="border:
0px none; font-size: 15px; font-style: inherit; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline; color: rgb(51, 122, 183);
text-decoration: none;">Ensembl Protists</a><span
class="Apple-converted-space"> </span>contains 11 new
genomes, along with revised genomic assemblies for more than
25 other species. Variation data have been newly included for<span
class="Apple-converted-space"> </span><em style="border: 0px
none; font-size: 15px; font-style: italic; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline;">Phaeodactylum tricornutum</em>,
and have been updated for<span class="Apple-converted-space"> </span><em
style="border: 0px none; font-size: 15px; font-style:
italic; font-weight: inherit; margin: 0px; outline: 0px
none; padding: 0px; vertical-align: baseline;">Phytophthora
infestans</em><span class="Apple-converted-space"> </span>and<span
class="Apple-converted-space"> </span><em style="border: 0px
none; font-size: 15px; font-style: italic; font-weight:
inherit; margin: 0px; outline: 0px none; padding: 0px;
vertical-align: baseline;">Plasmodium falciparum</em>; new
comparative<span class="Apple-converted-space"> </span>peptide analyses
have also been performed.<font face="Helvetica
Neue,sans-serif"><br>
</font></p>
</li>
</ul>
<p> The release notes are available at <a
class="moz-txt-link-freetext"
href="http://ensemblgenomes.org/info/release-notes/35">http://ensemblgenomes.org/info/release-notes/35</a>
<br>
<br>
and the blogpost can be found here: <a
class="moz-txt-link-freetext"
href="http://www.ensembl.info/blog/2017/04/19/ensembl-genomes-35-is-now-live/">http://www.ensembl.info/blog/2017/04/19/ensembl-genomes-35-is-now-live/</a>
<br>
<br>
<br>
Please don't hesitate to contact us with questions or comments at
<a class="moz-txt-link-abbreviated"
href="mailto:helpdesk@ensembl.org">helpdesk@ensembl.org</a> <br>
<br>
<br>
Best wishes <br>
<br>
The Ensembl Genomes Team <br>
<br>
@ensemblgenomes <br>
</p>
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