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Hi Michael,<br>
<br>
The tests appear to be failing because CGI.pm is not available. This
will only be a problem if you require the HTML output.<br>
<br>
Best wishes,<br>
<br>
Sarah<br>
<br>
<div class="moz-cite-prefix">On 12/05/2017 23:11, Michael Yourshaw
wrote:<br>
</div>
<blockquote
cite="mid:CANcs_JJEt8Jkmbn5zKPM+zFxnrdZ2=AMgX3tvbmvw1O_MhuCCg@mail.gmail.com"
type="cite">
<div dir="ltr">I'm trying to install the latest VEP on a Red Hat
7.3 linux box with perl 5.24.0. I fail two tests (Runner and
Stats). Can I safely ignore these with --NO_TEST?<br>
<br>
<font size="1"><span style="font-family:monospace,monospace">./t/Runner.t
..............................<wbr>........... Possible
precedence issue with control flow operator at
/home/yoursham/hdd/resources/<wbr>vep/Bio/DB/IndexedBase.pm
line 791.<br>
./t/Runner.t ..............................<wbr>...........
1/? <br>
# Failed test 'dump_stats - html exists'<br>
# at ./t/Runner.t line 340.<br>
./t/Runner.t ..............................<wbr>...........
66/? # Looks like you failed 1 test of 79.<br>
./t/Runner.t ..............................<wbr>...........
Dubious, test returned 1 (wstat 256, 0x100)<br>
Failed 1/79 subtests <br>
(less 6 skipped subtests: 72 okay)<br>
./t/Stats.t ..............................<wbr>............
Possible precedence issue with control flow operator at
/home/yoursham/hdd/resources/<wbr>vep/Bio/DB/IndexedBase.pm
line 791.<br>
./t/Stats.t ..............................<wbr>............
8/? Can't locate object method "new" via package "CGI" at
/home/yoursham/apps/ensembl-<wbr>vep/modules/Bio/EnsEMBL/VEP/<wbr>Stats.pm
line 522, <__ANONIO__> line 1.<br>
# Tests were run but no plan was declared and done_testing()
was not seen.<br>
# Looks like your test exited with 2 just after 26.<br>
./t/Stats.t ..............................<wbr>............
Dubious, test returned 2 (wstat 512, 0x200)<br>
</span></font><br>
<div>
<div class="gmail_signature">
<div dir="ltr">
<div>ॐ<br>
Michael Yourshaw<br>
<a moz-do-not-send="true" target="_blank"
href="mailto:myourshaw@ucla.edu">myourshaw@gmail.com</a><br>
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<br>
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