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<p>Hi Bob,</p>
<p>This page contains all the methods associated with our homology
object and how they are called<br>
</p>
<p><a class="moz-txt-link-freetext" href="http://www.ensembl.org/info/docs/Doxygen/compara-api/classBio_1_1EnsEMBL_1_1Compara_1_1Homology.html">http://www.ensembl.org/info/docs/Doxygen/compara-api/classBio_1_1EnsEMBL_1_1Compara_1_1Homology.html</a></p>
<p>Let me know if you need any other information<br>
</p>
<br>
<div class="moz-cite-prefix">On 07/11/2017 16:21, Bob Stephens
wrote:<br>
</div>
<blockquote type="cite"
cite="mid:CAKy+ccprnenU2MCDUuiibD98eghLDJA8OOXMJ9cPOKFOq3ohew@mail.gmail.com">
<div dir="ltr">Hello,
<div>I am just getting started with the core and compare APIs. I
would like to programmatically reproduce the nice table
produced online for a list of a gene's orthologs showing the
parent species, the orthodox id, the type of orthodox (eg. 1:1
etc.) and the pct ID and DN/DS information. I am having
trouble locating the documentation listing the available
attributes associated with the homology objects such
as $homology->description or taxonomy_level, ends_ratio
etc. or alternatively, is there a method that returns all
attribute-value pairs that I can select from for the table ?
sorry for the very basic question and thanks for the help</div>
<div>Bob</div>
<div><br>
</div>
</div>
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