<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
</head>
<body text="#000000" bgcolor="#FFFFFF">
<p><br>
</p>
<p>Hi Michael,</p>
<p>We have not changed the way these scores can be used in VEP -
data files need to be downloaded directly from the providers and
incorporated via the relevant plugins:</p>
<a class="moz-txt-link-freetext" href="https://github.com/Ensembl/VEP_plugins/blob/release/94/CADD.pm">https://github.com/Ensembl/VEP_plugins/blob/release/94/CADD.pm</a><br>
<p><a class="moz-txt-link-freetext" href="https://github.com/Ensembl/VEP_plugins/blob/release/94/dbNSFP.pm">https://github.com/Ensembl/VEP_plugins/blob/release/94/dbNSFP.pm</a></p>
<p>We don't redistribute these data as they are not necessarily free
for commercial use.</p>
<p>Best wishes,</p>
<p>Sarah<br>
</p>
<div class="moz-cite-prefix">On 28/12/2018 20:43, Michael Yourshaw
wrote:<br>
</div>
<blockquote type="cite"
cite="mid:CANcs_JLbAfi0RZBgx_V-+PqNeF60fo5o3rHo8KfVLr_6o-GgEw@mail.gmail.com">
<meta http-equiv="content-type" content="text/html; charset=UTF-8">
<div dir="ltr">
<div dir="ltr">I see that Ensembl 94 added some desirable new
pathogenicity predictions: CADD, REVEL, MetaLR, and
MutationAssessor.</div>
<div dir="ltr"><br>
</div>
<div>Are these available for the VEP 94 Perl API script with
cache, or will they be available in version 95?</div>
<div><br>
</div>
<div>Thanks,</div>
<div dir="ltr"><br clear="all">
<div>
<div dir="ltr" class="gmail_signature">
<div dir="ltr">
<div>ॐ<br>
Michael Yourshaw<br>
<a href="mailto:myourshaw@ucla.edu" target="_blank"
moz-do-not-send="true">myourshaw@gmail.com</a><br>
<br>
This message is intended only for the use of the
addressee and may contain information that is
PRIVILEGED and CONFIDENTIAL, and/or may contain
ATTORNEY WORK PRODUCT. If you are not the intended
recipient, you are hereby notified that any
dissemination of this communication is strictly
prohibited. If you have received this communication in
error, please erase all copies of the message and its
attachments and notify us immediately. Thank you.</div>
</div>
</div>
</div>
</div>
</div>
<br>
<fieldset class="mimeAttachmentHeader"></fieldset>
<pre class="moz-quote-pre" wrap="">_______________________________________________
Dev mailing list <a class="moz-txt-link-abbreviated" href="mailto:Dev@ensembl.org">Dev@ensembl.org</a>
Posting guidelines and subscribe/unsubscribe info: <a class="moz-txt-link-freetext" href="http://lists.ensembl.org/mailman/listinfo/dev">http://lists.ensembl.org/mailman/listinfo/dev</a>
Ensembl Blog: <a class="moz-txt-link-freetext" href="http://www.ensembl.info/">http://www.ensembl.info/</a>
</pre>
</blockquote>
</body>
</html>