<html><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class="">Hi Simon<div class=""><br class=""></div><div class="">TSL and APPRIS are both stored as attributes on the transcript. You can get them with get_all_Attributes:</div><div class=""><a href="http://www.ensembl.org/info/docs/Doxygen/core-api/classBio_1_1EnsEMBL_1_1Transcript.html#a59f9ff2079a28ba80bc8b62a5e636327" class="">http://www.ensembl.org/info/docs/Doxygen/core-api/classBio_1_1EnsEMBL_1_1Transcript.html#a59f9ff2079a28ba80bc8b62a5e636327</a></div><div class=""><br class=""></div><div class="">This will give you a list of hashes where you can extract the information.</div><div class=""><br class=""></div><div class="">All the best</div><div class=""><br class=""></div><div class="">Emily<br class=""><div><br class=""><blockquote type="cite" class=""><div class="">On 21 Mar 2019, at 11:46, Simon Andrews <<a href="mailto:simon.andrews@babraham.ac.uk" class="">simon.andrews@babraham.ac.uk</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div class="WordSection1" style="page: WordSection1; caret-color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;"><div style="margin: 0cm 0cm 0.0001pt; font-size: 11pt; font-family: Calibri, sans-serif;" class="">I see that on the Ensembl website the transcript table has some really useful flags on it, things such as Transcript Support Level and APRIS category. I’d really like to add these to the annotations I’m building. Is there an easy way to access these through the Perl API?<o:p class=""></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 11pt; font-family: Calibri, sans-serif;" class=""><br class="">Thanks<o:p class=""></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 11pt; font-family: Calibri, sans-serif;" class=""><o:p class=""> </o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 11pt; font-family: Calibri, sans-serif;" class="">Simon.<o:p class=""></o:p></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 11pt; font-family: Calibri, sans-serif;" class=""><o:p class=""> </o:p></div></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: rgb(0, 0, 0); font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><o:p class=""></o:p><o:p class=""></o:p><span style="font-size: 8pt; font-family: Arial, sans-serif; color: rgb(31, 73, 125);" class="">The Babraham Institute, Babraham Research Campus, Cambridge CB22 3AT<span class="Apple-converted-space"> </span></span><i class=""><span style="font-size: 8pt; font-family: Arial, sans-serif; color: rgb(54, 95, 145);" class="">Registered Charity No. 1053902.</span></i><span style="font-size: 8pt; font-family: Arial, sans-serif; color: rgb(31, 73, 125);" class=""><o:p class=""></o:p></span></div><div style="margin: 0cm 0cm 0.0001pt; font-size: 11pt; font-family: Calibri, sans-serif; caret-color: rgb(0, 0, 0); font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px; text-decoration: none;" class=""><span style="font-size: 8pt; font-family: Arial, sans-serif; color: rgb(31, 73, 125);" class="">The information transmitted in this email is directed only to the addressee. 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<div dir="auto" style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px;">--</div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px;"><br class=""></div><div style="color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant-caps: normal; font-weight: normal; letter-spacing: normal; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px; -webkit-text-stroke-width: 0px;">Dr Emily Perry (Pritchard) <br class="">Ensembl Outreach Project Leader <br class=""><br class="">European Bioinformatics Institute (EMBL-EBI) <br class="">European Molecular Biology Laboratory <br class="">Wellcome Trust Genome Campus <br class="">Hinxton <br class="">Cambridge <br class="">CB10 1SD <br class="">UK</div></div>
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