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<p>Hi -</p>

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<p>Does anyone know how the VEP command line program's stats_html utility calculates the following (i.e., what VCF columns and operations it uses)?</p>

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<p>- VCF file pre-processing</p>

<p>- Number of overlapped genes</p>

<p>- Number of overlapped transcripts</p>

<p>- Number of overlapped regulatory features<br>

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Thank you,

<p>Margaret<br>

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