<html>
<head>
<meta http-equiv="Content-Type" content="text/html;
charset=windows-1252">
</head>
<body>
<p>Hi Sage,</p>
<p>If you want to use the GRCh37 REST server version, then
dbNSFPv4.0a.zip is the one. You can use this version of zip as
long as you process it according to the plugin instructions for
GRCh37.</p>
<p>The dbNSFPv3.5a can also be found on dbNSFP's google drive. Hope
that link works for you: <a
href="https://sites.google.com/site/jpopgen/dbNSFP">https://sites.google.com/site/jpopgen/dbNSFP
.<br>
</a></p>
<p>Kind regards,</p>
<p>Irina<br>
</p>
<p><br>
</p>
<div class="moz-cite-prefix">On 21/08/2020 19:56, Sage Hornung
wrote:<br>
</div>
<blockquote type="cite"
cite="mid:20200821185804.8D2BB119E23_F40193CB@hh-mx4.ebi.ac.uk">
<meta http-equiv="Content-Type" content="text/html;
charset=windows-1252">
<meta name="Generator" content="Microsoft Word 15 (filtered
medium)">
<!--[if !mso]><style>v\:* {behavior:url(#default#VML);}
o\:* {behavior:url(#default#VML);}
w\:* {behavior:url(#default#VML);}
.shape {behavior:url(#default#VML);}
</style><![endif]-->
<style><!--
/* Font Definitions */
@font-face
{font-family:"Cambria Math";
panose-1:2 4 5 3 5 4 6 3 2 4;}
@font-face
{font-family:Calibri;
panose-1:2 15 5 2 2 2 4 3 2 4;}
/* Style Definitions */
p.MsoNormal, li.MsoNormal, div.MsoNormal
{margin:0in;
margin-bottom:.0001pt;
font-size:11.0pt;
font-family:"Calibri",sans-serif;}
a:link, span.MsoHyperlink
{mso-style-priority:99;
color:#0563C1;
text-decoration:underline;}
a:visited, span.MsoHyperlinkFollowed
{mso-style-priority:99;
color:#954F72;
text-decoration:underline;}
span.EmailStyle17
{mso-style-type:personal-compose;
font-family:"Calibri",sans-serif;
color:windowtext;}
.MsoChpDefault
{mso-style-type:export-only;}size:8.5in 11.0in;
margin:1.0in 1.0in 1.0in 1.0in;}
div.WordSection1
{page:WordSection1;}</style><!--[if gte mso 9]><xml>
<o:shapedefaults v:ext="edit" spidmax="1026" />
</xml><![endif]--><!--[if gte mso 9]><xml>
<o:shapelayout v:ext="edit">
<o:idmap v:ext="edit" data="1" />
</o:shapelayout></xml><![endif]-->
<div class="WordSection1">
<p class="MsoNormal">Hi,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">The instructions in the vep plugin page for
the dbNSFP plugin say to use the dbNSFPv3.5a.zip for
GRCh37/hg19 but it’s no longer available at
<a href="ftp://dbnsfp:dbnsfp@dbnsfp.softgenetics.com"
moz-do-not-send="true">ftp://dbnsfp:dbnsfp@dbnsfp.softgenetics.com</a>
<o:p></o:p></p>
<p class="MsoNormal">Any suggestions as to what I can use for
GRCh37? Can I use the dbNSFPv4.0a.zip. (I did find the 3.5a
version elsewhere)<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">I would like to use the same version found
here <a href="https://grch37.rest.ensembl.org/"
moz-do-not-send="true">
https://grch37.rest.ensembl.org/</a><o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Thank You,<o:p></o:p></p>
<p class="MsoNormal">Sage<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"
style="mso-line-height-alt:12.05pt;text-autospace:none"><b><span
style="font-size:14.0pt;color:#004A97">Sage Hornung</span></b><span
style="font-size:14.0pt;color:#004A97"><o:p></o:p></span></p>
<p class="MsoNormal"
style="margin-bottom:7.0pt;line-height:12.05pt;text-autospace:none">
<i><span style="font-size:12.0pt;color:#004A97">Software
Engineer </span></i><span
style="font-size:12.0pt;color:#004A97"><o:p></o:p></span></p>
<p class="MsoNormal"
style="line-height:12.05pt;text-autospace:none"><b><span
style="color:#424242">NeoGenomics Laboratories, Inc.</span></b><span
style="color:#424242"><o:p></o:p></span></p>
<p class="MsoNormal"
style="line-height:12.05pt;text-autospace:none"><span
style="color:#424242">2131 Faraday Avenue, Carlsbad, CA
92008<o:p></o:p></span></p>
<p class="MsoNormal"
style="line-height:12.05pt;text-autospace:none"><b><span
style="color:#424242">Phone:
</span></b><span style="color:#424242">760.516.5114<o:p></o:p></span></p>
<p class="MsoNormal"
style="line-height:12.05pt;text-autospace:none"><b><span
style="color:#424242">Cell:
</span></b><span style="color:#424242">760.755.3930<o:p></o:p></span></p>
<p class="MsoNormal"
style="line-height:12.05pt;text-autospace:none"><a
href="mailto:sage.hornung@neogenomics.com"
moz-do-not-send="true">sage.hornung@neogenomics.com</a><o:p></o:p></p>
<p class="MsoNormal" style="margin-bottom:12.0pt"><a
href="http://neogenomics.com/" moz-do-not-send="true"><span
style="color:#004A97">neogenomics.com</span></a><span
style="color:#004A97"><o:p></o:p></span></p>
<p class="MsoNormal" style="margin-bottom:12.0pt"><a
href="http://neogenomics.com/" moz-do-not-send="true"><span
style="color:#5B9BD5;text-decoration:none"><img
style="width:1.25in;height:.5208in" id="Picture_x0020_1"
src="cid:part6.FC4EF580.C89F0057@ebi.ac.uk"
alt="cid:image001.png@01D27B05.09A580E0" class=""
width="120" height="50" border="0"></span></a><span
style="color:#5B9BD5"><o:p></o:p></span></p>
<p class="MsoNormal"><a
href="https://www.linkedin.com/company/neogenomics-laboratories/"
moz-do-not-send="true"><span
style="color:#5B9BD5;text-decoration:none"><img
style="width:.3125in;height:.3125in"
id="Picture_x0020_2"
src="cid:part8.3FBBB33D.471533F4@ebi.ac.uk"
alt="cid:image002.png@01D2789A.338CAE00" class=""
width="30" height="30" border="0"></span></a><span
style="color:#5B9BD5">
</span><a href="https://twitter.com/NeoGenomics"
moz-do-not-send="true"><span
style="color:#5B9BD5;text-decoration:none"><img
style="width:.3125in;height:.3125in"
id="Picture_x0020_3"
src="cid:part10.C7784213.D445128A@ebi.ac.uk"
alt="cid:image003.png@01D2789A.338CAE00" class=""
width="30" height="30" border="0"></span></a><span
style="color:#5B9BD5"> </span><a
href="https://www.youtube.com/channel/UCBa0vLyn1ZO7tW-RyJOrxPA"
moz-do-not-send="true"><span
style="color:#5B9BD5;text-decoration:none"><img
style="width:.3125in;height:.3125in"
id="Picture_x0020_4"
src="cid:part12.4206E61F.081A9A1B@ebi.ac.uk"
alt="cid:image004.png@01D2789A.338CAE00" class=""
width="30" height="30" border="0"></span></a><span
style="color:#1F497D"><o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
</div>
This communication and its attachments contain confidential
information and is intended only for the named addressee. If you
are not the named addressee you should not disseminate, distribute
or copy this communication. Please notify the sender immediately
if you have received this communication by mistake and delete or
destroy this communication. Communications cannot be guaranteed to
be secured or error-free as information could be intercepted,
corrupted, lost, destroyed, arrive late or incomplete, or contain
viruses. The sender therefore does not accept liability for any
errors or omissions in the contents of this communication which
arise as a result of transmission. If verification is required
please request a hard-copy version. NeoGenomics Laboratories,
12701 Commonwealth Dr, Fort Myers, FL 33913,
<a class="moz-txt-link-freetext" href="http://www.neogenomics.com">http://www.neogenomics.com</a> (2020)
<br>
<fieldset class="mimeAttachmentHeader"></fieldset>
<pre class="moz-quote-pre" wrap="">_______________________________________________
Dev mailing list <a class="moz-txt-link-abbreviated" href="mailto:Dev@ensembl.org">Dev@ensembl.org</a>
Posting guidelines and subscribe/unsubscribe info: <a class="moz-txt-link-freetext" href="https://lists.ensembl.org/mailman/listinfo/dev_ensembl.org">https://lists.ensembl.org/mailman/listinfo/dev_ensembl.org</a>
Ensembl Blog: <a class="moz-txt-link-freetext" href="http://www.ensembl.info/">http://www.ensembl.info/</a>
</pre>
</blockquote>
<pre class="moz-signature" cols="72">--
Irina Armean PhD, Bioinformatican
Ensembl Variation, EMBL-EBI, Hinxton, UK
</pre>
</body>
</html>