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<div style="font-family:微软雅黑,Verdana,"Microsoft Yahei",SimSun,sans-serif;font-size:14px; line-height:1.6;"><div style="text-indent: 2em;"><p class="MsoNormal" style="text-indent:21.0pt"><span lang="EN-US">Hello ,i want to
report a bug.<o:p></o:p></span></p>
<p class="MsoNormal" style="text-indent:21.0pt"><span lang="EN-US">The Ensembl's
version is Ensembl Genes 105;<o:p></o:p></span></p>
<p class="MsoNormal" style="text-indent:21.0pt"><span lang="EN-US">Take a species
as an example : Dog (Canis lupus familiaris) ,which's reference genome is ROS Cfam 1.0.The bug is
the gene name extract form Biomart is different from fasta file or gtf file.If
we extract gene name from fasta file or gtf file, the gene name is all empty,
but in Biomart the gene name is not
empty;<o:p></o:p></span></p>
<p class="MsoNormal" style="text-indent:21.0pt"><span lang="EN-US">The same bug
also happen in Callorhinchus mili , f we extract gene name from fasta file or
gtf file, most of the gene names are empty, but a few have gene names , but
some of the empty gene name has gene name in Biomart,such as CBX7,CBX8,CNOT3...<o:p></o:p></span></p>
<p class="MsoNormal" style="text-indent:21.0pt"><span lang="EN-US">In general, in
some species(probably in 70 species), the correspondence between gene IDs and gene names extracted from
fasta files or gtf files is different from that in Biomart. Fatsa files contain
a large number of genes without gene names, but there are genes in Biomart.
name, such as Dog (Canis lupus familiaris)
and Callorhinchus mili.<o:p></o:p></span></p></div></div><div style="font-family:微软雅黑,Verdana,"Microsoft Yahei",SimSun,sans-serif;font-size:14px; line-height:1.6;"><div>
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