<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8">
<style type="text/css" style="display:none;"> P {margin-top:0;margin-bottom:0;} </style>
</head>
<body dir="ltr">
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);" class="elementToProof">
Hi Ben,</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);" class="elementToProof">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);" class="elementToProof">
thank you for that information. Do you have any additional information about this? most notably, where could those files be found? For our analysis a full archive of the analysis data we need is required, and those two are the last ones missing.</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);" class="elementToProof">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);" class="elementToProof">
Kind regards</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);" class="elementToProof">
<br>
</div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);" class="elementToProof">
Beat</div>
<div class="elementToProof">
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
<br>
</div>
<div id="Signature" data-lt-sig-active="">
<div>
<div style="font-family: Calibri, Arial, Helvetica, sans-serif; font-size: 12pt; color: rgb(0, 0, 0);">
<table width="624" style="font-size: 15px; font-family: wf_segoe-ui_normal, "Segoe UI", "Segoe WP", Tahoma, Arial, sans-serif, serif, EmojiFont; text-align: start; width: 468pt; border-collapse: collapse; background-color: rgb(255, 255, 255);">
<tbody>
<tr>
<td width="10" valign="top" style="width: 7.15pt; padding: 0cm; background-color: rgb(0, 112, 192);">
</td>
<td width="5" valign="top" style="width:4pt; padding:0cm">
<p style="margin-top:0px; margin-bottom:0px"><span style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont"> </span></p>
</td>
<td width="609" valign="top" style="width:456.85pt; padding:0cm">
<p style="margin-top:0px; margin-bottom:0px"><b><span style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont" data-lt-sig="">Dr Beat Wolf, PhD ▪ Assistant Professor ▪ Member of iCoSys Institute<br>
</span></b><span style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont" data-lt-sig="">University of Applied Sciences and Arts Western Switzerland ▪ Pérolles 80 ▪ CH-1700 Fribourg<br>
Member of University of Applied Sciences of Western Switzerland<br>
</span><span lang="FR" style="margin: 0px; font-size: 8pt; font-family: Arial, sans-serif, serif, EmojiFont; color: blue;"><a href="https://eia-fr.ch/" target="_blank" rel="noopener noreferrer" style="margin:0px"><span lang="EN-GB" style="margin:0px" data-lt-sig="">https://www.heia-fr.ch</span></a></span><span style="margin: 0px; font-size: 8pt; font-family: Arial, sans-serif, serif, EmojiFont; color: blue;"> </span><span style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont" data-lt-sig="">▪ <a href="http://humantech.institute/" target="_blank" rel="noopener noreferrer" style="margin:0px"></a><a href="https://icosys.ch/" target="_blank" rel="noopener noreferrer" style="margin:0px" data-lt-sig="">https://icosys.ch/</a></span></p>
</td>
</tr>
</tbody>
</table>
<br>
</div>
</div>
</div>
</div>
<div id="appendonsend"></div>
<hr style="display:inline-block;width:98%" tabindex="-1">
<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>Von:</b> Dev <dev-bounces@ensembl.org> im Auftrag von Benjamin Moore <bmoore@ebi.ac.uk><br>
<b>Gesendet:</b> Mittwoch, 27. September 2023 13:43<br>
<b>An:</b> dev@ensembl.org <dev@ensembl.org><br>
<b>Betreff:</b> Re: [ensembl-dev] BioMart information on FTP server</font>
<div> </div>
</div>
<div>
<p>Hi Beat,</p>
<p><br>
</p>
<p>The mim_gene_accession and rnacentral mappings are not included in the Ensembl FTP file dumps.<br>
</p>
<p><br>
</p>
<p>Best wishes</p>
<p><br>
</p>
<p>Ben</p>
<p><br>
</p>
<div class="x_moz-cite-prefix">On 24/09/2023 14:24, Wolf Beat wrote:<br>
</div>
<blockquote type="cite"><style type="text/css" style="display:none">
<!--
p
{margin-top:0;
margin-bottom:0}
-->
</style>
<div class="x_elementToProof" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
Hi,</div>
<div class="x_elementToProof" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
<br>
</div>
<div class="x_elementToProof" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
i have a question on how to find some information in the ensembl FTP server.</div>
<div class="x_elementToProof" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
<br>
</div>
<div class="x_elementToProof" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
Notably, the GRCH38 i'm wondering where i can find the following two fields which are accessible through BioMart:</div>
<div class="x_elementToProof" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
<br>
</div>
<div class="x_elementToProof x_ContentPasted0" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
mim_gene_accession<br>
</div>
<div class="x_elementToProof x_ContentPasted0 x_ContentPasted1" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
rnacentral<br>
</div>
<div class="x_elementToProof x_ContentPasted0 x_ContentPasted1" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
<br>
</div>
<div class="x_elementToProof x_ContentPasted0 x_ContentPasted1" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
I could find all other information that i looked for, but those i'm can't find.</div>
<div class="x_elementToProof x_ContentPasted0 x_ContentPasted1" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
<br>
</div>
<div class="x_elementToProof x_ContentPasted0 x_ContentPasted1" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
Kind regards</div>
<div class="x_elementToProof x_ContentPasted0 x_ContentPasted1" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
<br>
</div>
<div class="x_elementToProof x_ContentPasted0 x_ContentPasted1" style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
Beat Wolf</div>
<div class="x_elementToProof">
<div style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
<br>
</div>
<div id="x_Signature" data-lt-sig-active="">
<div>
<div style="font-family:Calibri,Arial,Helvetica,sans-serif; font-size:12pt; color:rgb(0,0,0)">
<table width="624" style="font-size:15px; font-family:wf_segoe-ui_normal,"Segoe UI","Segoe WP",Tahoma,Arial,sans-serif,serif,EmojiFont; text-align:start; width:468pt; border-collapse:collapse; background-color:rgb(255,255,255)">
<tbody>
<tr>
<td width="10" valign="top" style="width:7.15pt; padding:0cm; background-color:rgb(0,112,192)">
<br>
</td>
<td width="5" valign="top" style="width:4pt; padding:0cm">
<p style="margin-top:0px; margin-bottom:0px"><span style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont"> </span></p>
</td>
<td width="609" valign="top" style="width:456.85pt; padding:0cm">
<p style="margin-top:0px; margin-bottom:0px"><b><span data-lt-sig="" style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont">Dr Beat Wolf, PhD ▪ Assistant Professor ▪ Member of iCoSys Institute<br>
</span></b><span data-lt-sig="" style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont">University of Applied Sciences and Arts Western Switzerland ▪ Pérolles 80 ▪ CH-1700 Fribourg<br>
Member of University of Applied Sciences of Western Switzerland<br>
</span><span lang="FR" style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont; color:blue"><a href="https://eia-fr.ch/" target="_blank" rel="noopener noreferrer" style="margin:0px"><span data-lt-sig="" lang="EN-GB" style="margin:0px">https://www.heia-fr.ch</span></a></span><span style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont; color:blue"> </span><span data-lt-sig="" style="margin:0px; font-size:8pt; font-family:Arial,sans-serif,serif,EmojiFont">▪ <a href="https://icosys.ch/" target="_blank" rel="noopener noreferrer" data-lt-sig="" class="x_moz-txt-link-freetext" style="margin:0px">https://icosys.ch/</a></span></p>
</td>
</tr>
</tbody>
</table>
<br>
</div>
</div>
</div>
</div>
<br>
<fieldset class="x_moz-mime-attachment-header"></fieldset>
<pre class="x_moz-quote-pre">_______________________________________________
Dev mailing list <a class="x_moz-txt-link-abbreviated" href="mailto:Dev@ensembl.org">Dev@ensembl.org</a>
Posting guidelines and subscribe/unsubscribe info: <a class="x_moz-txt-link-freetext" href="https://lists.ensembl.org/mailman/listinfo/dev_ensembl.org">https://lists.ensembl.org/mailman/listinfo/dev_ensembl.org</a>
Ensembl Blog: <a class="x_moz-txt-link-freetext" href="http://www.ensembl.info/">http://www.ensembl.info/</a>
</pre>
</blockquote>
<pre class="x_moz-signature" cols="72">--
Dr. Ben Moore (he/him)
Ensembl Outreach Manager
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton
Cambridge
CB10 1SD
UK
<a class="x_moz-txt-link-abbreviated" href="mailto:bmoore@ebi.ac.uk">bmoore@ebi.ac.uk</a>
+44 (0)1223 494265</pre>
</div>
</body>
</html>