<html><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;" class=""><div class="">Dear Ensembl, </div><div class=""><br class=""></div><div class="">I am trying to get the "age of base" as described here :</div><div class=""><a href="https://www.ensembl.org/info/genome/compara/age_of_base.html" class="">https://www.ensembl.org/info/genome/compara/age_of_base.html</a> </div><div class=""><br class=""></div><div class="">Basically, for a slice like this, I’d like to get those “age”. </div><div class="">$slice = $hsap_slice_adaptor->fetch_by_region( 'toplevel', '19' , '1581091','1581269');</div><div class=""><br class=""></div><div class=""><br class=""></div><div class="">It has been a while since I last used the ensembl API (prob ~v60), so I wonder if I could get those values from a core slice (which I doubt), most likely from a compara object, but which one ? Is this something stored in the compara db for human, or computed on the fly from a multiple alignment objet ?</div><div class=""><br class=""></div><div class="">The Doxygen doc is not of much of any help for me I am afraid, as I can’t get much info there. </div><div class=""><br class=""></div><div class="">Any embryo of code to get me on track would be must appreciated. </div><div class=""><br class=""></div><div class="">I am on version 111 of core and compara. </div><div class=""><br class=""></div><div class="">Thanks,</div><div class=""><br class=""></div>Ben<br class=""><div class=""><div dir="auto" class="" style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;"><div class="" style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;"><div class="" style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;"><div class="" style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;">--<br class="">Benoît Ballester, PhD<br class="">Inserm U1090, TAGC<br class="">Campus de Luminy<br class="">13288 Marseille Cedex 9<br class="">France<br class="">+33 4 91 82 87 28<br class="">(1st) <a href="mailto:benoit.ballester@inserm.fr" class="">benoit.ballester@inserm.fr</a><br class="">(2nd) <a href="mailto:benoit.ballester@univ-amu.fr" class="">benoit.ballester@univ-amu.fr</a> </div><div class="" style="word-wrap: break-word; -webkit-nbsp-mode: space; line-break: after-white-space;">ReMap2022: <a href="http://remap.univ-amu.fr/" class="">http://remap.univ-amu.fr/</a></div></div></div></div></div></body></html>